IL_8UJ9_010

3D structure

PDB id

8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

CCGCUCGUGG*CGGCG

Length

15 nucleotides

Bulged bases

8UJ9|1|L5|C|183, 8UJ9|1|L5|G|186, 8UJ9|1|L5|G|188

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJ9|1|L5|C|180
8UJ9|1|L5|C|181
8UJ9|1|L5|G|182
8UJ9|1|L5|C|183
8UJ9|1|L5|U|184
8UJ9|1|L5|C|185
8UJ9|1|L5|G|186
8UJ9|1|L5|U|187
8UJ9|1|L5|G|188
8UJ9|1|L5|G|189
*
8UJ9|1|L5|C|252
8UJ9|1|L5|G|253
8UJ9|1|L5|G|254
8UJ9|1|L5|C|255
8UJ9|1|L5|G|256

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LL

Large ribosomal subunit protein eL13

Chain Lh

60S ribosomal protein L35

Chain Lj

60S ribosomal protein L37