IL_8UJ9_027

3D structure

PDB id

8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GCCCGG*UCC

Length

9 nucleotides

Bulged bases

8UJ9|1|L5|C|501, 8UJ9|1|L5|C|502, 8UJ9|1|L5|C|503, 8UJ9|1|L5|G|504

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJ9|1|L5|G|500
8UJ9|1|L5|C|501
8UJ9|1|L5|C|502
8UJ9|1|L5|C|503
8UJ9|1|L5|G|504
8UJ9|1|L5|G|505
*
8UJ9|1|L5|U|653
8UJ9|1|L5|C|654
8UJ9|1|L5|C|655

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LQ

60S ribosomal protein L18

Chain La

60S ribosomal protein L27a