IL_8UJ9_033

3D structure

PDB id

8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

8UJ9|1|L5|A|932, 8UJ9|1|L5|C|934, 8UJ9|1|L5|A|935, 8UJ9|1|L5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJ9|1|L5|A|732
8UJ9|1|L5|A|733
8UJ9|1|L5|G|734
8UJ9|1|L5|G|735
*
8UJ9|1|L5|C|928
8UJ9|1|L5|A|929
8UJ9|1|L5|G|930
8UJ9|1|L5|C|931
8UJ9|1|L5|A|932
8UJ9|1|L5|G|933
8UJ9|1|L5|C|934
8UJ9|1|L5|A|935
8UJ9|1|L5|C|936
8UJ9|1|L5|U|937

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a