IL_8UJ9_036

3D structure

PDB id

8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GAAGGUGGCU*AGUGUUACAGC

Length

21 nucleotides

Bulged bases

8UJ9|1|L5|G|748, 8UJ9|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJ9|1|L5|G|745
8UJ9|1|L5|A|746
8UJ9|1|L5|A|747
8UJ9|1|L5|G|748
8UJ9|1|L5|G|749
8UJ9|1|L5|U|750
8UJ9|1|L5|G|751
8UJ9|1|L5|G|752
8UJ9|1|L5|C|753
8UJ9|1|L5|U|754
*
8UJ9|1|L5|A|909
8UJ9|1|L5|G|910
8UJ9|1|L5|U|911
8UJ9|1|L5|G|912
8UJ9|1|L5|U|913
8UJ9|1|L5|U|914
8UJ9|1|L5|A|915
8UJ9|1|L5|C|916
8UJ9|1|L5|A|917
8UJ9|1|L5|G|918
8UJ9|1|L5|C|919

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a