IL_8UJ9_125

3D structure

PDB id

8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

AGACAUGAG*CUGAUCGUUU

Length

19 nucleotides

Bulged bases

8UJ9|1|L5|A|3947

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJ9|1|L5|A|3945
8UJ9|1|L5|G|3946
8UJ9|1|L5|A|3947
8UJ9|1|L5|C|3948
8UJ9|1|L5|A|3949
8UJ9|1|L5|U|3950
8UJ9|1|L5|G|3951
8UJ9|1|L5|A|3952
8UJ9|1|L5|G|3953
*
8UJ9|1|L5|C|4059
8UJ9|1|L5|U|4060
8UJ9|1|L5|G|4061
8UJ9|1|L5|A|4062
8UJ9|1|L5|U|4063
8UJ9|1|L5|C|4064
8UJ9|1|L5|G|4065
8UJ9|1|L5|U|4066
8UJ9|1|L5|U|4067
8UJ9|1|L5|U|4068

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain Li

60S ribosomal protein L36

Chain Lz

60S ribosomal protein L10a

Chain SB

40S ribosomal protein S3a