IL_8UJ9_161

3D structure

PDB id

8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GGAAACGG*CUCGCC

Length

14 nucleotides

Bulged bases

8UJ9|1|L5|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJ9|1|L5|G|4890
8UJ9|1|L5|G|4891
8UJ9|1|L5|A|4892
8UJ9|1|L5|A|4893
8UJ9|1|L5|A|4894
8UJ9|1|L5|C|4895
8UJ9|1|L5|G|4896
8UJ9|1|L5|G|4897
*
8UJ9|1|L5|C|4924
8UJ9|1|L5|U|4925
8UJ9|1|L5|C|4926
8UJ9|1|L5|G|4927
8UJ9|1|L5|C|4928
8UJ9|1|L5|C|4929

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain LM

60S ribosomal protein L14

Chain LO

60S ribosomal protein L13a