IL_8UJ9_177
3D structure
- PDB id
- 8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 8UJ9|1|L7|U|84
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UJ9_177 not in the Motif Atlas
- Homologous match to IL_8P9A_370
- Geometric discrepancy: 0.1155
- The information below is about IL_8P9A_370
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
8UJ9|1|L7|G|82
8UJ9|1|L7|A|83
8UJ9|1|L7|U|84
8UJ9|1|L7|G|85
*
8UJ9|1|L7|C|92
8UJ9|1|L7|G|93
8UJ9|1|L7|C|94
Current chains
- Chain L7
- 5S rRNA [Homo sapiens]
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LF
- 60S ribosomal protein L7
- Chain LI
- Ribosomal protein uL16-like
- Chain LS
- 60S ribosomal protein L18a
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