IL_8UJ9_257

3D structure

PDB id

8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

UA*UCCCCCA

Length

9 nucleotides

Bulged bases

8UJ9|1|S2|C|1434, 8UJ9|1|S2|C|1437

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJ9|1|S2|U|1408
8UJ9|1|S2|A|1409
*
8UJ9|1|S2|U|1432
8UJ9|1|S2|C|1433
8UJ9|1|S2|C|1434
8UJ9|1|S2|C|1435
8UJ9|1|S2|C|1436
8UJ9|1|S2|C|1437
8UJ9|1|S2|A|1438

Current chains

Chain S2

18S rRNA [Homo sapiens]

Nearby chains

Chain SQ

Small ribosomal subunit protein uS9

Chain SU

40S ribosomal protein S20