IL_8UJB_033

3D structure

PDB id

8UJB (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 80S ribosome with EBP1 (consensus map)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

CUGGG*CG

Length

7 nucleotides

Bulged bases

8UJB|1|L5|G|729, 8UJB|1|L5|G|730

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJB|1|L5|C|727
8UJB|1|L5|U|728
8UJB|1|L5|G|729
8UJB|1|L5|G|730
8UJB|1|L5|G|731
*
8UJB|1|L5|C|938
8UJB|1|L5|G|939

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LF

60S ribosomal protein L7

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a