IL_8UJC_007

3D structure

PDB id

8UJC (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.87 Å

Loop

Sequence

CGAAU*ACAUGUG

Length

12 nucleotides

Bulged bases

8UJC|1|L5|G|119, 8UJC|1|L5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJC|1|L5|C|118
8UJC|1|L5|G|119
8UJC|1|L5|A|120
8UJC|1|L5|A|121
8UJC|1|L5|U|122
*
8UJC|1|L5|A|147
8UJC|1|L5|C|148
8UJC|1|L5|A|149
8UJC|1|L5|U|150
8UJC|1|L5|G|151
8UJC|1|L5|U|152
8UJC|1|L5|G|153

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LG

60S ribosomal protein L7a

Chain LN

60S ribosomal protein L15

Chain Lh

60S ribosomal protein L35