IL_8UJC_091
3D structure
- PDB id
- 8UJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- GUAGUAG*CGAAAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UJC_091 not in the Motif Atlas
- Homologous match to IL_8CRE_065
- Geometric discrepancy: 0.0756
- The information below is about IL_8CRE_065
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_26307.2
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
8UJC|1|L5|G|2358
8UJC|1|L5|U|2359
8UJC|1|L5|A|2360
8UJC|1|L5|G|2361
8UJC|1|L5|U|2362
8UJC|1|L5|A|2363
8UJC|1|L5|G|2364
*
8UJC|1|L5|C|3858
8UJC|1|L5|G|3859
8UJC|1|L5|A|3860
8UJC|1|L5|A|3861
8UJC|1|L5|A|3862
8UJC|1|L5|C|3863
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LP
- 60S ribosomal protein L17
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