IL_8UJD_018

3D structure

PDB id

8UJD (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 60S ribosome with eIF6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

GGUC*GCUAC

Length

9 nucleotides

Bulged bases

8UJD|1|L5|C|1301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJD|1|L5|G|443
8UJD|1|L5|G|444
8UJD|1|L5|U|445
8UJD|1|L5|C|446
*
8UJD|1|L5|G|1300
8UJD|1|L5|C|1301
8UJD|1|L5|U|1302
8UJD|1|L5|A|1303
8UJD|1|L5|C|1304

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain Le

60S ribosomal protein L32

Chain Lf

60S ribosomal protein L35a