IL_8UJD_034

3D structure

PDB id

8UJD (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 60S ribosome with eIF6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

CCGGCG*CCCCG

Length

11 nucleotides

Bulged bases

8UJD|1|L5|C|738

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJD|1|L5|C|737
8UJD|1|L5|C|738
8UJD|1|L5|G|739
8UJD|1|L5|G|740
8UJD|1|L5|C|741
8UJD|1|L5|G|742
*
8UJD|1|L5|C|922
8UJD|1|L5|C|923
8UJD|1|L5|C|924
8UJD|1|L5|C|925
8UJD|1|L5|G|926

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a