IL_8UJD_073
3D structure
- PDB id
- 8UJD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human 60S ribosome with eIF6
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- UUU*AGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UJD_073 not in the Motif Atlas
- Homologous match to IL_8CRE_050
- Geometric discrepancy: 0.0692
- The information below is about IL_8CRE_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UJD|1|L5|U|1861
8UJD|1|L5|U|1862
8UJD|1|L5|U|1863
*
8UJD|1|L5|A|1871
8UJD|1|L5|G|1872
8UJD|1|L5|A|1873
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LI
- Ribosomal protein uL16-like
- Chain LT
- 60S ribosomal protein L21
- Chain Lb
- Large ribosomal subunit protein eL29
Coloring options: