IL_8UJJ_123

3D structure

PDB id

8UJJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.56 Å

Loop

Sequence

GACAUGAG*CUGAUCGUU

Length

17 nucleotides

Bulged bases

8UJJ|1|L5|A|3947

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJJ|1|L5|G|3946
8UJJ|1|L5|A|3947
8UJJ|1|L5|C|3948
8UJJ|1|L5|A|3949
8UJJ|1|L5|U|3950
8UJJ|1|L5|G|3951
8UJJ|1|L5|A|3952
8UJJ|1|L5|G|3953
*
8UJJ|1|L5|C|4059
8UJJ|1|L5|U|4060
8UJJ|1|L5|G|4061
8UJJ|1|L5|A|4062
8UJJ|1|L5|U|4063
8UJJ|1|L5|C|4064
8UJJ|1|L5|G|4065
8UJJ|1|L5|U|4066
8UJJ|1|L5|U|4067

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Li

60S ribosomal protein L36