IL_8UJK_008
3D structure
- PDB id
- 8UJK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ HHT and CHX treated A-P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.54 Å
Loop
- Sequence
- CGAAU*ACAUGUG
- Length
- 12 nucleotides
- Bulged bases
- 8UJK|1|L5|G|119, 8UJK|1|L5|U|150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UJK|1|L5|C|118
8UJK|1|L5|G|119
8UJK|1|L5|A|120
8UJK|1|L5|A|121
8UJK|1|L5|U|122
*
8UJK|1|L5|A|147
8UJK|1|L5|C|148
8UJK|1|L5|A|149
8UJK|1|L5|U|150
8UJK|1|L5|G|151
8UJK|1|L5|U|152
8UJK|1|L5|G|153
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LG
- 60S ribosomal protein L7a
- Chain LN
- 60S ribosomal protein L15
- Chain Lh
- 60S ribosomal protein L35
Coloring options: