IL_8UJK_072
3D structure
- PDB id
- 8UJK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ HHT and CHX treated A-P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.54 Å
Loop
- Sequence
- UUU*AGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UJK_072 not in the Motif Atlas
- Homologous match to IL_8CRE_050
- Geometric discrepancy: 0.0962
- The information below is about IL_8CRE_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UJK|1|L5|U|1861
8UJK|1|L5|U|1862
8UJK|1|L5|U|1863
*
8UJK|1|L5|A|1871
8UJK|1|L5|G|1872
8UJK|1|L5|A|1873
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LI
- Ribosomal protein uL16-like
- Chain LT
- 60S ribosomal protein L21
- Chain Lb
- Large ribosomal subunit protein eL29
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