IL_8UJK_278

3D structure

PDB id

8UJK (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.54 Å

Loop

Sequence

CCCCG*CGGAGCG

Length

12 nucleotides

Bulged bases

8UJK|1|S2|C|1753, 8UJK|1|S2|C|1783

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJK|1|S2|C|1750
8UJK|1|S2|C|1751
8UJK|1|S2|C|1752
8UJK|1|S2|C|1753
8UJK|1|S2|G|1754
*
8UJK|1|S2|C|1778
8UJK|1|S2|G|1779
8UJK|1|S2|G|1780
8UJK|1|S2|A|1781
8UJK|1|S2|G|1782
8UJK|1|S2|C|1783
8UJK|1|S2|G|1784

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

Ribosomal protein L24