IL_8UKB_037

3D structure

PDB id

8UKB (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human hibernating state without E-tRNA 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GAAGGUGGCU*AGUGUUACAGC

Length

21 nucleotides

Bulged bases

8UKB|1|L5|G|748, 8UKB|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UKB|1|L5|G|745
8UKB|1|L5|A|746
8UKB|1|L5|A|747
8UKB|1|L5|G|748
8UKB|1|L5|G|749
8UKB|1|L5|U|750
8UKB|1|L5|G|751
8UKB|1|L5|G|752
8UKB|1|L5|C|753
8UKB|1|L5|U|754
*
8UKB|1|L5|A|909
8UKB|1|L5|G|910
8UKB|1|L5|U|911
8UKB|1|L5|G|912
8UKB|1|L5|U|913
8UKB|1|L5|U|914
8UKB|1|L5|A|915
8UKB|1|L5|C|916
8UKB|1|L5|A|917
8UKB|1|L5|G|918
8UKB|1|L5|C|919

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a