IL_8UQL_107

3D structure

PDB id

8UQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCCAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

8UQL|1|a|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UQL|1|a|C|1043
8UQL|1|a|C|1044
8UQL|1|a|C|1045
8UQL|1|a|A|1046
8UQL|1|a|G|1047
8UQL|1|a|A|1048
8UQL|1|a|C|1049
8UQL|1|a|A|1050
8UQL|1|a|G|1051
8UQL|1|a|C|1052
8UQL|1|a|C|1053
*
8UQL|1|a|G|1106
8UQL|1|a|G|1107
8UQL|1|a|U|1108
8UQL|1|a|C|1109
8UQL|1|a|G|1110
8UQL|1|a|A|1111
8UQL|1|a|G|1112

Current chains

Chain a

23S rRNA

Nearby chains

Chain 9

50S ribosomal protein L10

Chain p

50S ribosomal protein L6

Chain q

50S ribosomal protein L36