IL_8URM_023
3D structure
- PDB id
- 8URM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AAUUC*GUUAU
- Length
- 10 nucleotides
- Bulged bases
- 8URM|1|1|U|846, 8URM|1|1|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8URM_023 not in the Motif Atlas
- Geometric match to IL_5J7L_399
- Geometric discrepancy: 0.1424
- The information below is about IL_5J7L_399
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96236.1
- Basepair signature
- cWW-tWW-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8URM|1|1|A|844
8URM|1|1|A|845
8URM|1|1|U|846
8URM|1|1|U|847
8URM|1|1|C|848
*
8URM|1|1|G|930
8URM|1|1|U|931
8URM|1|1|U|932
8URM|1|1|A|933
8URM|1|1|U|934
Current chains
- Chain 1
- 13S ribosomal RNA
Nearby chains
- Chain Z
- 50S ribosomal protein L30
Coloring options: