IL_8URM_030
3D structure
- PDB id
- 8URM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GCAAG*CAACC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8URM_030 not in the Motif Atlas
- Geometric match to IL_4V9F_085
- Geometric discrepancy: 0.1783
- The information below is about IL_4V9F_085
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
8URM|1|1|G|875
8URM|1|1|C|876
8URM|1|1|A|877
8URM|1|1|A|878
8URM|1|1|G|879
*
8URM|1|1|C|898
8URM|1|1|A|899
8URM|1|1|A|900
8URM|1|1|C|901
8URM|1|1|C|902
Current chains
- Chain 1
- 13S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain M
- 50S ribosomal protein L16
Coloring options: