IL_8URM_038

3D structure

PDB id

8URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAAG*CGGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8URM|1|1|G|1037
8URM|1|1|G|1038
8URM|1|1|A|1039
8URM|1|1|A|1040
8URM|1|1|G|1041
*
8URM|1|1|C|1114
8URM|1|1|G|1115
8URM|1|1|G|1116
8URM|1|1|C|1117

Current chains

Chain 1

13S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L6

Chain M

50S ribosomal protein L16

Chain V

Large ribosomal subunit protein bL25

Chain f

50S ribosomal protein L36