3D structure

PDB id
8URM (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UUCUGUAAG*UAUCAGAA
Length
17 nucleotides
Bulged bases
8URM|1|1|A|1205
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8URM|1|1|U|1198
8URM|1|1|U|1199
8URM|1|1|C|1200
8URM|1|1|U|1201
8URM|1|1|G|1202
8URM|1|1|U|1203
8URM|1|1|A|1204
8URM|1|1|A|1205
8URM|1|1|G|1206
*
8URM|1|1|U|1240
8URM|1|1|A|1241
8URM|1|1|U|1242
8URM|1|1|C|1243
8URM|1|1|A|1244
8URM|1|1|G|1245
8URM|1|1|A|1246
8URM|1|1|A|1247

Current chains

Chain 1
13S ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L4
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20

Coloring options:

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