IL_8URM_051

3D structure

PDB id

8URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

8URM|1|1|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8URM_051 not in the Motif Atlas

Geometric match to IL_5J7L_295

Geometric discrepancy: 0.1519

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

8URM|1|1|C|1417
8URM|1|1|G|1418
8URM|1|1|A|1419
8URM|1|1|A|1420
8URM|1|1|G|1421
*
8URM|1|1|C|1577
8URM|1|1|U|1578
8URM|1|1|A|1579
8URM|1|1|A|1580
8URM|1|1|G|1581

Current chains

Chain 1

13S ribosomal RNA

Nearby chains