IL_8URM_086

3D structure

PDB id

8URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUGGGAG*CGACCUUGAAAUACCACC

Length

25 nucleotides

Bulged bases

8URM|1|1|G|2125, 8URM|1|1|C|2164, 8URM|1|1|G|2168, 8URM|1|1|A|2169, 8URM|1|1|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8URM|1|1|G|2121
8URM|1|1|U|2122
8URM|1|1|G|2123
8URM|1|1|G|2124
8URM|1|1|G|2125
8URM|1|1|A|2126
8URM|1|1|G|2127
*
8URM|1|1|C|2161
8URM|1|1|G|2162
8URM|1|1|A|2163
8URM|1|1|C|2164
8URM|1|1|C|2165
8URM|1|1|U|2166
8URM|1|1|U|2167
8URM|1|1|G|2168
8URM|1|1|A|2169
8URM|1|1|A|2170
8URM|1|1|A|2171
8URM|1|1|U|2172
8URM|1|1|A|2173
8URM|1|1|C|2174
8URM|1|1|C|2175
8URM|1|1|A|2176
8URM|1|1|C|2177
8URM|1|1|C|2178

Current chains

Chain 1

13S ribosomal RNA

Nearby chains