IL_8URM_119

3D structure

PDB id

8URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GG*UGC

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8URM_119 not in the Motif Atlas

Homologous match to IL_8B0X_008

Geometric discrepancy: 0.3837

The information below is about IL_8B0X_008

Detailed Annotation

GG cWH outside loop

Broad Annotation

GG cWH outside loop

Motif group

IL_28408.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

77

Unit IDs

8URM|1|2|G|75
8URM|1|2|G|76
*
8URM|1|2|U|93
8URM|1|2|G|94
8URM|1|2|C|95

Current chains

Chain 2

16S ribosomal RNA

Nearby chains