IL_8URM_132

3D structure

PDB id

8URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAGGAAGGG*CAUUGACGUUAC

Length

22 nucleotides

Bulged bases

8URM|1|2|U|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8URM|1|2|G|446
8URM|1|2|G|447
8URM|1|2|A|448
8URM|1|2|G|449
8URM|1|2|G|450
8URM|1|2|A|451
8URM|1|2|A|452
8URM|1|2|G|453
8URM|1|2|G|454
8URM|1|2|G|455
*
8URM|1|2|C|477
8URM|1|2|A|478
8URM|1|2|U|479
8URM|1|2|U|480
8URM|1|2|G|481
8URM|1|2|A|482
8URM|1|2|C|483
8URM|1|2|G|484
8URM|1|2|U|485
8URM|1|2|U|486
8URM|1|2|A|487
8URM|1|2|C|488

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S4

Chain u

30S ribosomal protein S16