IL_8URM_154

3D structure

PDB id

8URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

8URM|1|2|U|1025, 8URM|1|2|U|1030, 8URM|1|2|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8URM|1|2|G|1003
8URM|1|2|A|1004
8URM|1|2|A|1005
8URM|1|2|G|1006
*
8URM|1|2|U|1023
8URM|1|2|G|1024
8URM|1|2|U|1025
8URM|1|2|G|1026
8URM|1|2|C|1027
8URM|1|2|C|1028
8URM|1|2|U|1029
8URM|1|2|U|1030
8URM|1|2|C|1031
8URM|1|2|G|1032
8URM|1|2|G|1033
8URM|1|2|G|1034
8URM|1|2|A|1035
8URM|1|2|A|1036
8URM|1|2|C|1037

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain s

Small ribosomal subunit protein uS14