IL_8UTI_019
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- GUUUG*CAUAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UTI_019 not in the Motif Atlas
- Homologous match to IL_8P9A_250
- Geometric discrepancy: 0.1516
- The information below is about IL_8P9A_250
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87030.1
- Basepair signature
- cWW-cWW-cWW-L-R
- Number of instances in this motif group
- 3
Unit IDs
8UTI|1|A|G|680
8UTI|1|A|U|681
8UTI|1|A|U|682
8UTI|1|A|U|683
8UTI|1|A|G|684
*
8UTI|1|A|C|696
8UTI|1|A|A|697
8UTI|1|A|U|698
8UTI|1|A|A|699
8UTI|1|A|C|700
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein L4-A
- Chain LN
- 60S ribosomal protein L13-A
- Chain LP
- 60S ribosomal protein L15-A
- Chain Lc
- 60S ribosomal protein L28
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