IL_8UTI_059

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

GG*UUC

Length

5 nucleotides

Bulged bases

8UTI|1|A|U|1821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTI_059 not in the Motif Atlas

Homologous match to IL_8C3A_483

Geometric discrepancy: 0.3806

The information below is about IL_8C3A_483

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25360.1

Basepair signature

cWW-cWW

Number of instances in this motif group

10

Unit IDs

8UTI|1|A|G|1623
8UTI|1|A|G|1624
*
8UTI|1|A|U|1820
8UTI|1|A|U|1821
8UTI|1|A|C|1822

Current chains

Chain A

25S rRNA

Nearby chains

Chain Li

60S ribosomal protein L34-A

Chain Lm

60S ribosomal protein L38