IL_8UTI_064

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CC*GCG

Length

5 nucleotides

Bulged bases

8UTI|1|A|C|1779

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTI_064 not in the Motif Atlas

Homologous match to IL_8P9A_297

Geometric discrepancy: 0.0874

The information below is about IL_8P9A_297

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_05642.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

8UTI|1|A|C|1669
8UTI|1|A|C|1670
*
8UTI|1|A|G|1778
8UTI|1|A|C|1779
8UTI|1|A|G|1780

Current chains

Chain A

25S rRNA

Nearby chains

Chain LT

60S ribosomal protein L19-A

Chain Li

60S ribosomal protein L34-A