IL_8UTI_081

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

8UTI|1|A|U|2209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UTI|1|A|C|2204
8UTI|1|A|U|2205
8UTI|1|A|G|2206
8UTI|1|A|A|2207
8UTI|1|A|A|2208
8UTI|1|A|U|2209
8UTI|1|A|G|2210
*
8UTI|1|A|C|2235
8UTI|1|A|G|2236
8UTI|1|A|C|2237
8UTI|1|A|G|2238

Current chains

Chain A

25S rRNA

Nearby chains

Chain E

Small subunit ribosomal RNA; SSU rRNA

Chain LD

60S ribosomal protein L2-A

Chain SQ

40S ribosomal protein S1-A