IL_8UTI_102

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CU*AACG

Length

6 nucleotides

Bulged bases

8UTI|1|A|A|2941, 8UTI|1|A|C|2942

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTI_102 not in the Motif Atlas

Homologous match to IL_8C3A_117

Geometric discrepancy: 0.0773

The information below is about IL_8C3A_117

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

8UTI|1|A|C|2881
8UTI|1|A|U|2882
*
8UTI|1|A|A|2940
8UTI|1|A|A|2941
8UTI|1|A|C|2942
8UTI|1|A|G|2943

Current chains

Chain A

25S rRNA

Nearby chains

Chain LE

60S ribosomal protein L3

Chain LX

60S ribosomal protein L23-A

Chain m

Transfer RNA; tRNA