IL_8UTI_118
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- UACGAAUAAG*CGCUGAA
- Length
- 17 nucleotides
- Bulged bases
- 8UTI|1|A|A|3180, 8UTI|1|A|A|3186, 8UTI|1|A|U|3207, 8UTI|1|A|A|3209
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UTI_118 not in the Motif Atlas
- Homologous match to IL_8P9A_352
- Geometric discrepancy: 0.1025
- The information below is about IL_8P9A_352
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28855.1
- Basepair signature
- cWW-L-R-L-cWW-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8UTI|1|A|U|3179
8UTI|1|A|A|3180
8UTI|1|A|C|3181
8UTI|1|A|G|3182
8UTI|1|A|A|3183
8UTI|1|A|A|3184
8UTI|1|A|U|3185
8UTI|1|A|A|3186
8UTI|1|A|A|3187
8UTI|1|A|G|3188
*
8UTI|1|A|C|3204
8UTI|1|A|G|3205
8UTI|1|A|C|3206
8UTI|1|A|U|3207
8UTI|1|A|G|3208
8UTI|1|A|A|3209
8UTI|1|A|A|3210
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LH
- 60S ribosomal protein L6-B
- Chain LK
- 60S ribosomal protein L9-A
- Chain LO
- 60S ribosomal protein L14-A
- Chain LQ
- 60S ribosomal protein L16-A
- Chain LU
- 60S ribosomal protein L20-A
- Chain Lh
- 60S ribosomal protein L33-A
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