IL_8UTI_148

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

UCGU*AA

Length

6 nucleotides

Bulged bases

8UTI|1|E|C|114

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTI_148 not in the Motif Atlas

Homologous match to IL_8P9A_381

Geometric discrepancy: 0.1303

The information below is about IL_8P9A_381

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71421.1

Basepair signature

cWW-cWW

Number of instances in this motif group

27

Unit IDs

8UTI|1|E|U|113
8UTI|1|E|C|114
8UTI|1|E|G|115
8UTI|1|E|U|116
*
8UTI|1|E|A|300
8UTI|1|E|A|301

Current chains

Chain E

18S rRNA

Nearby chains

Chain SS

40S ribosomal protein S4-A

Chain SV

40S ribosomal protein S8-A

Chain SX

40S ribosomal protein S11-A