IL_8UTI_152

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

GUA*UUUUC

Length

8 nucleotides

Bulged bases

8UTI|1|E|U|260

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTI_152 not in the Motif Atlas

Homologous match to IL_8P9A_386

Geometric discrepancy: 0.5317

The information below is about IL_8P9A_386

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36931.1

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

23

Unit IDs

8UTI|1|E|G|204
8UTI|1|E|U|205
8UTI|1|E|A|206
*
8UTI|1|E|U|259
8UTI|1|E|U|260
8UTI|1|E|U|261
8UTI|1|E|U|262
8UTI|1|E|C|263

Current chains

Chain E

18S rRNA

Nearby chains

Chain SS

40S ribosomal protein S4-A

Chain ST

40S ribosomal protein S6-A

Chain SV

40S ribosomal protein S8-A