IL_8UTI_154

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

AAU*AU

Length

5 nucleotides

Bulged bases

8UTI|1|E|A|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTI_154 not in the Motif Atlas

Homologous match to IL_8P9A_388

Geometric discrepancy: 0.1516

The information below is about IL_8P9A_388

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

134

Unit IDs

8UTI|1|E|A|265
8UTI|1|E|A|266
8UTI|1|E|U|267
*
8UTI|1|E|A|288
8UTI|1|E|U|289

Current chains

Chain E

18S rRNA

Nearby chains

Chain SS

40S ribosomal protein S4-A

Chain ST

40S ribosomal protein S6-A