IL_8UTI_155

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CAUG*UGG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTI_155 not in the Motif Atlas

Homologous match to IL_8P9A_389

Geometric discrepancy: 0.211

The information below is about IL_8P9A_389

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15698.4

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

10

Unit IDs

8UTI|1|E|C|270
8UTI|1|E|A|271
8UTI|1|E|U|272
8UTI|1|E|G|273
*
8UTI|1|E|U|283
8UTI|1|E|G|284
8UTI|1|E|G|285

Current chains

Chain E

18S rRNA

Nearby chains

Chain ST

40S ribosomal protein S6-A