3D structure

PDB id
8UTI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.13 Å

Loop

Sequence
AUAAGGAUUG*CUUGAUUU
Length
18 nucleotides
Bulged bases
8UTI|1|E|G|1228
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UTI|1|E|A|1224
8UTI|1|E|U|1225
8UTI|1|E|A|1226
8UTI|1|E|A|1227
8UTI|1|E|G|1228
8UTI|1|E|G|1229
8UTI|1|E|A|1230
8UTI|1|E|U|1231
8UTI|1|E|U|1232
8UTI|1|E|G|1233
*
8UTI|1|E|C|1252
8UTI|1|E|U|1253
8UTI|1|E|U|1254
8UTI|1|E|G|1255
8UTI|1|E|A|1256
8UTI|1|E|U|1257
8UTI|1|E|U|1258
8UTI|1|E|U|1259

Current chains

Chain E
18S rRNA

Nearby chains

Chain SC
40S ribosomal protein S10-A
Chain SD
40S ribosomal protein S12
Chain SM
40S ribosomal protein S29-A
Chain SN
40S ribosomal protein S31

Coloring options:

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