IL_8UTI_204
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 8UTI|1|E|A|1427
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UTI_204 not in the Motif Atlas
- Homologous match to IL_8C3A_458
- Geometric discrepancy: 0.1678
- The information below is about IL_8C3A_458
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 112
Unit IDs
8UTI|1|E|C|1280
8UTI|1|E|G|1281
*
8UTI|1|E|C|1426
8UTI|1|E|A|1427
8UTI|1|E|G|1428
Current chains
- Chain E
- 18S rRNA
Nearby chains
- Chain D
- Messenger RNA (5'-R(P*AP*AP*UP*AP*AP*UP*GP*AP*AP*AP*A)-3')
- Chain SA
- 40S ribosomal protein S3
- Chain SF
- 40S ribosomal protein S16-A
- Chain SJ
- 40S ribosomal protein S20
- Chain SM
- 40S ribosomal protein S29-A
- Chain SR
- 40S ribosomal protein S2
- Chain m
- Transfer RNA; tRNA
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