IL_8UTI_205

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

UGG*CGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTI_205 not in the Motif Atlas

Homologous match to IL_8P9A_442

Geometric discrepancy: 0.1162

The information below is about IL_8P9A_442

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.1

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

39

Unit IDs

8UTI|1|E|U|1290
8UTI|1|E|G|1291
8UTI|1|E|G|1292
*
8UTI|1|E|C|1323
8UTI|1|E|G|1324
8UTI|1|E|A|1325

Current chains

Chain E

18S rRNA

Nearby chains

Chain SA

40S ribosomal protein S3

Chain SG

40S ribosomal protein S17-B

Chain SP

40S ribosomal protein S0-A

Chain SR

40S ribosomal protein S2