IL_8UTI_211
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- GCCAGCGA*UUGUGAAAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UTI_211 not in the Motif Atlas
- Homologous match to IL_8C3A_466
- Geometric discrepancy: 0.1259
- The information below is about IL_8C3A_466
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48143.1
- Basepair signature
- cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8UTI|1|E|G|1480
8UTI|1|E|C|1481
8UTI|1|E|C|1482
8UTI|1|E|A|1483
8UTI|1|E|G|1484
8UTI|1|E|C|1485
8UTI|1|E|G|1486
8UTI|1|E|A|1487
*
8UTI|1|E|U|1519
8UTI|1|E|U|1520
8UTI|1|E|G|1521
8UTI|1|E|U|1522
8UTI|1|E|G|1523
8UTI|1|E|A|1524
8UTI|1|E|A|1525
8UTI|1|E|A|1526
8UTI|1|E|C|1527
Current chains
- Chain E
- 18S rRNA
Nearby chains
- Chain AA
- 40S ribosomal protein S25-A
- Chain SA
- 40S ribosomal protein S3
- Chain SB
- 40S ribosomal protein S5
- Chain SF
- 40S ribosomal protein S16-A
- Chain SI
- 40S ribosomal protein S19-A
- Chain SJ
- 40S ribosomal protein S20
- Chain SM
- 40S ribosomal protein S29-A
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