3D structure

PDB id
8UTJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GGAGCACG*CGUGUGAC
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UTJ|1|1|G|536
8UTJ|1|1|G|537
8UTJ|1|1|A|538
8UTJ|1|1|G|539
8UTJ|1|1|C|540
8UTJ|1|1|A|541
8UTJ|1|1|C|542
8UTJ|1|1|G|543
*
8UTJ|1|1|C|550
8UTJ|1|1|G|551
8UTJ|1|1|U|552
8UTJ|1|1|G|553
8UTJ|1|1|U|554
8UTJ|1|1|G|555
8UTJ|1|1|A|556
8UTJ|1|1|C|557

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain J
Large ribosomal subunit protein uL13
Chain Q
50S ribosomal protein L20
Chain R
Ribosomal protein L21

Coloring options:

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