IL_8UTJ_031

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

8UTJ|1|1|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTJ_031 not in the Motif Atlas

Geometric match to IL_8UO6_001

Geometric discrepancy: 0.3487

The information below is about IL_8UO6_001

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

8UTJ|1|1|G|880
8UTJ|1|1|G|881
*
8UTJ|1|1|U|895
8UTJ|1|1|A|896
8UTJ|1|1|C|897

Current chains

Chain 1

23S ribosomal RNA

Nearby chains