IL_8UTJ_032
3D structure
- PDB id
- 8UTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCA*UG
- Length
- 5 nucleotides
- Bulged bases
- 8UTJ|1|1|C|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UTJ_032 not in the Motif Atlas
- Geometric match to IL_4WF9_035
- Geometric discrepancy: 0.1737
- The information below is about IL_4WF9_035
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
8UTJ|1|1|C|994
8UTJ|1|1|C|995
8UTJ|1|1|A|996
*
8UTJ|1|1|U|1159
8UTJ|1|1|G|1160
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain J
- Large ribosomal subunit protein uL13
- Chain Q
- 50S ribosomal protein L20
- Chain R
- Ribosomal protein L21
- Chain Z
- 50S ribosomal protein L30
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