IL_8UTJ_088

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

8UTJ|1|1|U|2111, 8UTJ|1|1|G|2115, 8UTJ|1|1|U|2118, 8UTJ|1|1|A|2119

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UTJ|1|1|G|2110
8UTJ|1|1|U|2111
8UTJ|1|1|G|2112
8UTJ|1|1|U|2113
8UTJ|1|1|A|2114
8UTJ|1|1|G|2115
8UTJ|1|1|G|2116
8UTJ|1|1|A|2117
8UTJ|1|1|U|2118
8UTJ|1|1|A|2119
8UTJ|1|1|G|2120
*
8UTJ|1|1|C|2178
8UTJ|1|1|C|2179

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain A

Large ribosomal subunit protein uL1