IL_8UTJ_160

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGUG*CC

Length

6 nucleotides

Bulged bases

8UTJ|1|2|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTJ_160 not in the Motif Atlas

Geometric match to IL_7A0S_005

Geometric discrepancy: 0.3596

The information below is about IL_7A0S_005

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

48

Unit IDs

8UTJ|1|2|G|1047
8UTJ|1|2|G|1048
8UTJ|1|2|U|1049
8UTJ|1|2|G|1050
*
8UTJ|1|2|C|1209
8UTJ|1|2|C|1210

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain s

Small ribosomal subunit protein uS14