IL_8UU4_090

3D structure

PDB id

8UU4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAGAGAC*GAGGAG

Length

15 nucleotides

Bulged bases

8UU4|1|A|A|2165

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UU4|1|A|C|2162
8UU4|1|A|G|2163
8UU4|1|A|A|2164
8UU4|1|A|A|2165
8UU4|1|A|G|2166
8UU4|1|A|A|2167
8UU4|1|A|G|2168
8UU4|1|A|A|2169
8UU4|1|A|C|2170
*
8UU4|1|A|G|2187
8UU4|1|A|A|2188
8UU4|1|A|G|2189
8UU4|1|A|G|2190
8UU4|1|A|A|2191
8UU4|1|A|G|2192

Current chains

Chain A

23S Ribosomal RNA

Nearby chains