IL_8UU5_025
3D structure
- PDB id
- 8UU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGUAAA*UAC
- Length
- 9 nucleotides
- Bulged bases
- 8UU5|1|A|A|892
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU5_025 not in the Motif Atlas
- Geometric match to IL_9H3G_096
- Geometric discrepancy: 0.3976
- The information below is about IL_9H3G_096
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42776.1
- Basepair signature
- cWW-L-R-cSH-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
8UU5|1|A|G|889
8UU5|1|A|G|890
8UU5|1|A|U|891
8UU5|1|A|A|892
8UU5|1|A|A|893
8UU5|1|A|A|894
*
8UU5|1|A|U|979
8UU5|1|A|A|980
8UU5|1|A|C|981
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein uL30
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